Protein Info for PFLU_RS10205 in Pseudomonas fluorescens SBW25

Annotation: acyltransferase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 349 transmembrane" amino acids 10 to 28 (19 residues), see Phobius details amino acids 34 to 54 (21 residues), see Phobius details amino acids 74 to 90 (17 residues), see Phobius details amino acids 111 to 131 (21 residues), see Phobius details amino acids 141 to 161 (21 residues), see Phobius details amino acids 173 to 196 (24 residues), see Phobius details amino acids 208 to 226 (19 residues), see Phobius details amino acids 238 to 257 (20 residues), see Phobius details amino acids 269 to 287 (19 residues), see Phobius details amino acids 299 to 321 (23 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 7 to 320 (314 residues), 101.1 bits, see alignment E=3.4e-33

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU2071)

Predicted SEED Role

"Extracellular Matrix protein PslL"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K537 at UniProt or InterPro

Protein Sequence (349 amino acids)

>PFLU_RS10205 acyltransferase family protein (Pseudomonas fluorescens SBW25)
MKHRWIQMDIAKGIGILVIVYAHSWFVATSPDVLYPILASFILPLFFFLSGVFFKPEQPF
VEMAVRKADGLLKPFFFTMLTYVIVRSILRGQPLLPDIGGVLYASVDTIPWQALWFLPHF
WVAILFSWVVLRLIQRLPLAVRCLVMLVPLLIGIWTLPWFWQRPVTLGGSTWVLPGLPFS
LDITLISSTCFIYGYLLRDWLRTHAGSLLTLLVSVVLFAAVFLYRGDTMDLAQRRYDHWL
WTSLMAVIGVYACWALARVLMVSALITRGMTYIGQSTLILLIFHGEIQHKTFDLMERLGL
PALIAACIGFVVAVVVPLLIGEVIKRVAFLRFFYFPFPVRKAVGEKAPT