Protein Info for PFLU_RS02845 in Pseudomonas fluorescens SBW25

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1065 transmembrane" amino acids 408 to 426 (19 residues), see Phobius details amino acids 462 to 487 (26 residues), see Phobius details PF20178: DUF6543" amino acids 73 to 348 (276 residues), 154.4 bits, see alignment E=2.2e-49

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU0576)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K599 at UniProt or InterPro

Protein Sequence (1065 amino acids)

>PFLU_RS02845 hypothetical protein (Pseudomonas fluorescens SBW25)
MTRHQGVHFELIKNAIPQCLLQSSTARRKALKAIQPDSPDGYEALTEPQQSVLKKLAEAS
CHAQNQFDLSNRGIQDITGFAKPLLVAALKSAGHELDVDNTWLRLYYPVEYTFFGIPVGV
NTAGYRTRTFSLLQAALNNFEAFEAQPDYFDSVSSFISAPDAQGHFDIVRIKLTLAQFVA
ICRTLDIGGLYAKHLNDFFHGGTQAEQVAISTAYTLNQKAALKAAAYLALLKEDIELRHY
ELLVDVIHDKDDVRDNGRPITYSPLRILGYNLTECAVFFRTHANRYDGGYVIAYIPDDPD
HPVKTYPSFRDFEAELTHQLMYRPEGSRIDNGRDVLTDYQRFFSRFLSEKDRPHFFLRLT
QKVLDSPAGSNWKDDLRGYLKYLSPVSNLKGPIEDRHWRRDPRENVELHISLSLNFQWVG
LSGIWYEMFGQWRQRRLDDGQVLAVSTAKEDTLTRERRLSNFLNVGMLVVGIAAFVAPPV
GAAMLLVTANQLISSVFEGVRDWRQGDVEAAWAHLTDVLESLATLAEMAVIFHYVASPFV
EGLKAVKLPNGQTRLWKPNLSAYARRVPLPTDLQPDHLGLYRLAGRSVLLLDEQQYEVVQ
DPQSGHYSARHPTRGNAYQPRLRHNGEGVWTHELDQPLQWQGAQLRDRLGVAFERFDDVQ
RKQILAVSTMSEDVLRKLYVESEPFPGLLKDTLRRFAADADAREVIEQIRRGRCSSTLCD
YAAALMVDLPGWPANTLIEVFSPFGEQARYGLRSALAGDILRVSKADLMAGKLPERSVQF
LNDEQIKQVLGQHAPADATARAAQLQQRLAAFAERSGQRLFNSLYSDEPLLSGDSQRALI
QVIQRRFPEMPTSIAREVLYRATPKELETLNTPFGPSAEQRRLIPLRISEALRYLQQRVR
IARAYEGLYLESPANPDTPTLVLKTLETLPGWSGEVRIELRDESLSGSLRTSVGPPFALE
TKVLVKNGTRYQAFDGQGHELHAPDTLYAALQHALPDSERTAMGRPHVSEAPALKHAIQD
NALAPKALRKALNLPVETPWFERVMRVAARRDGYPLNAVCGEVAL