Protein Info for PFLU_RS01490 in Pseudomonas fluorescens SBW25

Annotation: cellulose biosynthesis protein BcsC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1279 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF13432: TPR_16" amino acids 42 to 92 (51 residues), 20.8 bits, see alignment (E = 3.1e-07) amino acids 397 to 443 (47 residues), 21.4 bits, see alignment (E = 2.1e-07) amino acids 467 to 528 (62 residues), 24.7 bits, see alignment 1.9e-08 PF14559: TPR_19" amino acids 397 to 449 (53 residues), 36.1 bits, see alignment (E = 4.6e-12) amino acids 472 to 530 (59 residues), 43.6 bits, see alignment 2.1e-14 amino acids 696 to 761 (66 residues), 30.5 bits, see alignment 2.6e-10 PF13181: TPR_8" amino acids 466 to 493 (28 residues), 16.5 bits, see alignment (E = 5.5e-06) amino acids 788 to 817 (30 residues), 12.6 bits, see alignment (E = 9.3e-05) PF12895: ANAPC3" amino acids 474 to 553 (80 residues), 28.5 bits, see alignment 1.1e-09 PF13431: TPR_17" amino acids 482 to 514 (33 residues), 22.2 bits, see alignment (E = 8.4e-08) PF05420: BCSC_C" amino acids 934 to 1260 (327 residues), 351.5 bits, see alignment E=3.5e-108

Best Hits

Swiss-Prot: 100% identical to BCSC_PSEFS: Cellulose synthase operon protein C (bscS) from Pseudomonas fluorescens (strain SBW25)

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU0304)

Predicted SEED Role

"Cellulose synthase operon protein C"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P58937 at UniProt or InterPro

Protein Sequence (1279 amino acids)

>PFLU_RS01490 cellulose biosynthesis protein BcsC (Pseudomonas fluorescens SBW25)
MRRHTLAIAILAALASTASVAETSDPQSLLIEQGYYWQSKKNPERALETWQKLLRLSPDQ
PDALYGIGLIQVQQNHPAEAQKYLARLQALSPVPRQALQLEQDITVAVPDNAKLLEQARE
LGEPEAEREQAVALYRQIFQGRQPQGLIAREYYNTLGFTAKGSSEAIAGLQRLTRERPND
PIVALFLAKHLARNPATRPDGIRALAKLASNNDVGGNADETWRFALVWLGPPKPDQVSLF
QQFLTVHPDDSEIRALMNKGIAQGKGGGTWQRDPQMTKAFKALDDGDLKTAEPLLAARLA
QKSNDVDALGGMGVLRQQQERYSEAENYLVQATRLPGGAAWQSALNDVRYWNLISQSRDA
QRAGRSAQARDLVAQAERLNPGQPGAAIALAGFQAQDNQFDDAEAGYRKVLARHPGDPDA
LSGLINVLSQSGQPDEALKLIDSVSPAQRAKFAPSVKINALRATQVGKLAEQRGDLKAAQ
AAYRQALDADPENPWTRFALARMYLRDGQIRNARALIDGLLKSQPNQPDALYTSTLLSAQ
LSEWKQAEATLGRIPTAQRTADMNELATDIALHQQTDIAIETARRGQRPEALALLGRSEP
LTRNKPERVAVLAAAYVEVGAAQYGLDMMQKVVENNPNPTVDQKLLYANVLLKANKYSEA
GEILREVQGQPLTETGRQRYDDLIYLYRVKQADALREKNDLVAAYDMLSPALAQRPNDAL
GVGALARMYAASGNGKKAMELYAPLIQQNPNNARLQLGLADIALKGNDRGLAQSASDKAL
ALEPGNPEILTSAARIYQGLGKNSEAAELLRKALAIENAMKAKTQVAQASAPGTSYNPFV
GLPGQRRQVTDLTVAGAVPPPIDAPTKSVTSNAFASATSNDLSDPFVPPSSIASIDSPEL
SPARRALDTILRDRTGYVVQGLSVRSNNGEKGLSKITDVEAPFEARMPVGDNTVALRVTP
VHLSAGSVKAESLSRFGKGGTEPAGSQSDSGVGLAVAFENPDQGLKADVGVSPLGFLYNT
LVGGVSVSRPFEANSNFRYGANISRRPVTDSVTSFAGSEDGAGNKWGGVTANGGRGELSY
DNQKLGVYGYASLHELLGNNVEDNTRLELGSGIYWYLRNNPRDTLTLGISGSAMTFKENQ
DFYTYGNGGYFSPQRFFSLGVPIRWAQSFDRFSYQVKSSVGLQHIAQDGADYFPGDSTLQ
ATKNNPKYDSTSKTGVGYSFNAAAEYRLSSRFYLGGEIGLDNAQDYRQYAGNAYLRYLFE
DLSGPMPLPVSPYRSPYSN