Protein Info for PFLU_RS01480 in Pseudomonas fluorescens SBW25

Annotation: cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 755 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details transmembrane" amino acids 724 to 746 (23 residues), see Phobius details PF03170: BcsB" amino acids 48 to 659 (612 residues), 714.8 bits, see alignment E=4.4e-219

Best Hits

Swiss-Prot: 100% identical to BCSB_PSEFS: Cyclic di-GMP-binding protein (bcsB) from Pseudomonas fluorescens (strain SBW25)

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU0302)

Predicted SEED Role

"Cyclic di-GMP binding protein precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P58934 at UniProt or InterPro

Protein Sequence (755 amino acids)

>PFLU_RS01480 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB (Pseudomonas fluorescens SBW25)
MTSNIFARPHPRRALALMIASLMGFNTLAQAAEQAVATVPVQSTDTGYSLTLKQLGRRDT
MNLQGVESSDSVNFDIRADEVVKGAQLLLKYSYSPALLADLSQINVLVNGEVAASLPLPK
EGAGTPQEQLVQIPAHLITEFNRLSLQFIGHYTMSCEDPLHSSLWAKISNSSELKVQVEP
IVLKDDLAVLPLPFFDKRDARQVSLPFVFATAPDSAALEAAGALSSWIGGLASYRGATFP
TTLGELPAKGNAIVLVQTADAMDIHGVAVAKPAGPTLTLIANPNDANGKLLIVTGRDGAE
LKRAANAVVLGNPVLAGNSVVITKLDTLAPRRPYDAPNWLPSNRPVRLGELIEQQKLSVS
GYNPGAISVDMRLPPDLFNWREEGVPLKLKYRYTPQQVSTNSSLLIGLNDQFMKSVALPS
VSNLGGGQTLLDQLKKDESLPREVTTLLPISSASPKSKLQVRFMYDYIKEGECRDIIVDN
MRGSVDPDSTLDVTGYQHYIAMPNLGVFNDSGFPFTRLADLSESAVVMPDNYGTDELTAY
LTVLGRFGEATGYPATAVKVVQAKDVQSVADKDLLVLATAANQPLLKQWQQYLPATSDGE
QHQFLLSDLPRYVRSWISPDPAANQHPANTGITFKGLSNSTWLAGFQSPLKSGRSVVLIA
SNQPQGLLEATNALIGGDDYKDSIQGSLAVVQGTQISSLVGDEQYYVGKLNYFKFMQWQL
SQNLGWMLLITFLGLAVVTSLIYLSLRARAKRRLA