Protein Info for OLJFJH_04835 in Erwinia amylovora T8

Annotation: cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 831 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 784 to 806 (23 residues), see Phobius details PF03170: BcsB" amino acids 112 to 718 (607 residues), 621.8 bits, see alignment E=6.2e-191

Best Hits

KEGG orthology group: None (inferred from 100% identity to eay:EAM_3386)

Predicted SEED Role

"Cyclic di-GMP binding protein precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (831 amino acids)

>OLJFJH_04835 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB (Erwinia amylovora T8)
MKQLIVRALCLYTLLTPGGVQADAASVTGDSNALATIPPPVDVVSAAPGAIPAPQPSRAG
IEPQQGHPPGAVMPNDPLAGNGSVLPEDPPLSAVADEQPATSMSALNQPTSSTLSVAEMG
QKQGITLSGGQLQSGIIFTLPNDEVITHARLNLSLKVSQALAARNTSLQLMLNGQPLGTL
PLGATENNSEDYELEIPAAMVVSSNNLSFKINDADRLMCERDSTRLYQVTILPKSTLALE
GQQLKIGNSLRHFPRPFIDPLRMSQANVPMTFGHHVTPGEVSAAAIIASWMGIQADYRGV
SFPVIRGQLPEQNGVVFGHPGEKIGSLTLPAGEGPSLQIIDNPDNPVYKLLLVTGKDDEA
LRQASWRLLQPLELDAPQLAVADQHMPLREPYDAPRWISTDRPVSLSELLRKDQSLTTTG
IWHDALRVNFRAAPDLFLWDGDSVPVRLNYRFPSESWIDEDNSLLNVTLNGTFLRNLTVN
KVGLLENIWHRLGGDARLEQYTLRLDPYLIYGDNQMQLYFNIKPKDSAPCSVLANNNIKS
RIEDNSFIDLSHTRHFALLPNLAYFVGASFPFSRLADYSQTVFMLPEEPSDSEISTLLDM
AGRSGNATGVALFHNSVMFGVPSDGPLREKLANSDILAVSTLVQGEFTQQMLVDSPYELN
DHTLGVKVPGLLNKLRGWLNGDWYRQTLAADRYLSSNEDWRGFISYRSPWNSSRLMVMAL
ATNDQQLGRLHNDMTSRRINAGIRGDTAIITDENGIRSFRVGAQFPSGEMPWYMMVVWYA
NQHAVMLSLLALFCATVIGLSAWVLLDRHARRRLHPLDKLRPSDEKKDNEK