Protein Info for OLJFJH_00855 in Erwinia amylovora T8

Annotation: protein YacL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 120 PF06062: UPF0231" amino acids 1 to 117 (117 residues), 142.1 bits, see alignment E=5.8e-46

Best Hits

Swiss-Prot: 88% identical to Y829_ERWT9: UPF0231 protein ETA_08290 (ETA_08290) from Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99)

KEGG orthology group: K09910, hypothetical protein (inferred from 100% identity to eam:EAMY_2807)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (120 amino acids)

>OLJFJH_00855 protein YacL (Erwinia amylovora T8)
MEYEFLSDITGAVKVRMSMGHEAVGHWFNDEVSDNPEILAEVEAAIAQVKGSERQWQRVG
REYTLLLDAEEVMIRANQLGFEGDEMEEGMTYYDEESLSFCGVEDFLKVIAAYRAFLSER