Protein Info for OKGIIK_16880 in Rhodanobacter sp. FW510-T8

Name: glnE
Annotation: bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 957 PF03710: GlnE" amino acids 40 to 280 (241 residues), 209.4 bits, see alignment E=6.3e-66 amino acids 556 to 806 (251 residues), 214.9 bits, see alignment E=1.2e-67 PF08335: GlnD_UR_UTase" amino acids 301 to 439 (139 residues), 96.2 bits, see alignment E=1.9e-31 amino acids 829 to 947 (119 residues), 26.1 bits, see alignment E=7.6e-10

Best Hits

Predicted SEED Role

"Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)" in subsystem Ammonia assimilation (EC 2.7.7.42)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.42

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (957 amino acids)

>OKGIIK_16880 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase (Rhodanobacter sp. FW510-T8)
MAIPESPALRALIDDRYADLAAHCRTAGVPLHDDAGVAERIRRTLMASDFAFDVWCRQPQ
LLAPAGLERLRSGLDAGARIDALKLPDDEAACMAALRRFRHAEALRLVFRDVNGLDELPE
TLSATSVLYEALLEAALGWSERALAARYGHARGPDGALQRLLVLGFGKLGGAELNFSSDI
DLVLAYPHGGQTDGARPLDHSEYFVRLGRQLVRLLNETTVDGICARVDLRLRPFGNAGRL
ALSFAAMEQYYQSEGRDWERYAWIKARPVAGDRAAGKQLQELLRPFVYRKYLDYTAFAGL
REMKALIDAEVARKDLADNLKLGPGGIREIEFIVQLTQLIRGGREPSLRVRGLLPALTAC
EARGHIGAARAKALREAYVLLRRVENRVQMLRDAQAHDIPADALSRERIARGLDYPDWDS
LHAALAARRAVVGEEFAAVLMPQGGRAARVPAADKLLWQHACDESLDAAMLEASGFAPGA
ELADALLKLPQAAAVRAMSARSRERLDHLMPQLFDAARATVAPVASLLRLCRLMQAVARR
SSYLALLEEQPAARRRLVRLFADSAFLAERVIAQPLLLDDVLDPRIDQLPLKRADITAEI
ARVLGTLEEREAEAELERINEFKASTAFRLGLAFNDGRADAVATARRLAALAESVVGAVL
ALAERELVAQHGRLPGTGMQPGSGFSVLGYGSLGGEELGFASDLDLVFVYDGRRAQALSD
GARPIEGSRWYQRLAQRVMNWLTVLTRGGRLYEVDTRLRPDGSKGLLVGSLDAFVAYQQS
RAWTWEHQALLRARPVAGDAALNAELAGVRRAILAVPRERATVLAEVGSMRARWRAERDR
SDQHRFDLKQGHGGLLDIEFALQGLVLAHAAGQPALLGVTANAGLIEACRVAGLLDGNQA
AILAVAHADLLQRALACTLDLRPRIAPRDAQLEQLCASVREVTAALGFAFGGPDNLP