Protein Info for OKGIIK_16795 in Rhodanobacter sp. FW510-T8

Annotation: EamA-like transporter family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 143 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details amino acids 36 to 55 (20 residues), see Phobius details amino acids 67 to 88 (22 residues), see Phobius details amino acids 99 to 118 (20 residues), see Phobius details amino acids 124 to 142 (19 residues), see Phobius details PF00892: EamA" amino acids 7 to 141 (135 residues), 75.8 bits, see alignment E=1.9e-25

Best Hits

Swiss-Prot: 53% identical to YCB6_SINSX: Uncharacterized transporter in cobO 3'region from Sinorhizobium sp.

KEGG orthology group: K08978, putative membrane protein (inferred from 65% identity to msu:MS0557)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (143 amino acids)

>OKGIIK_16795 EamA-like transporter family (Rhodanobacter sp. FW510-T8)
MQLRESWLLFALGSALFAALTALFGKLGVAGINSNLATFIRTVVILFVTAGILSLRQEWA
RPSGLPLHSWLFLVLSGIATGLSWLCYYRALQLGPVSKVAPIDKLSVAIAIVLALVFLGE
KPSLPLLFGGGLIVAGAVVIALA