Protein Info for OKGIIK_16400 in Rhodanobacter sp. FW510-T8

Annotation: Glycoside hydrolase family 17

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 526 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details transmembrane" amino acids 324 to 342 (19 residues), see Phobius details amino acids 350 to 369 (20 residues), see Phobius details amino acids 381 to 399 (19 residues), see Phobius details amino acids 419 to 437 (19 residues), see Phobius details amino acids 443 to 462 (20 residues), see Phobius details amino acids 475 to 493 (19 residues), see Phobius details amino acids 499 to 518 (20 residues), see Phobius details

Best Hits

KEGG orthology group: K01210, glucan 1,3-beta-glucosidase [EC: 3.2.1.58] (inferred from 45% identity to azo:azo1284)

Predicted SEED Role

"putative beta (1-6) glucans synthase"

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.58

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (526 amino acids)

>OKGIIK_16400 Glycoside hydrolase family 17 (Rhodanobacter sp. FW510-T8)
MSPAAPPVFRRVWPAWLALLLAALAGATWWWAIGRPVALPDAPSARIACVSYAPFRLAGE
TPLDARAYISPERIDADLRALSQRFDCVRTYSQGQGLSAVPEIAGRYGMQVLLGIWLGGD
AKSNAQQVALGIATANRYPQVVRGLIVGNEVLLRGELSPARLAGYLQQVRAAVGVPVTYA
DVWEFWLRHPELAGSVDYLTIHILPYWEDQPVPPEGAVQHVAAVYAKVQQAFPGRRVMIG
ETGWPSAGRPRQAASASVVNEARYLREFLRYAATVHMPYNVIEAFDQPWKRAQEGTAGGY
WGIFDAQARPKFAMQGPVTEEPRWWLGWLAAAAGGVLFALAGGRRRRAGRLALLLAGTAS
SSALAWQYRQALYACRDGWEWALSLAACALALLTALRLARWIAARLDGDPAPGVPPRWLR
AGWLFALAYYGLLLAVDGRYRDFPLGLFWLPCAGYALLGWLGERRAAVPPLPEERFLALW
PLPLALAVLVQEAGLTPVAWLWLGLNLLLVLPVLVEWWRGRRLVVP