Protein Info for OKGIIK_16015 in Rhodanobacter sp. FW510-T8

Annotation: Acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 317 transmembrane" amino acids 33 to 46 (14 residues), see Phobius details amino acids 223 to 243 (21 residues), see Phobius details PF03279: Lip_A_acyltrans" amino acids 93 to 298 (206 residues), 39.6 bits, see alignment E=1.9e-14

Best Hits

KEGG orthology group: None (inferred from 57% identity to xcc:XCC4008)

Predicted SEED Role

"Lysophospholipid acyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (317 amino acids)

>OKGIIK_16015 Acyltransferase (Rhodanobacter sp. FW510-T8)
MSMQGHWQSRPEGGGRFALWLIRTIALHGGRRLGRFCLYPITLYFFLRRGPERRASRQYL
QRVFGRPPTVWQVLRHIHCFAATTLDRIFLLAHGERPFQIETEGLALLDERIAQGRGVLL
FGSHQGSFEALRAISARRPEMSLRVVLDKQKTPAMTELLEALAPQVGASVIDAAQDGTTI
VLAMAEACQGGALVAMLADRGRGHEVLRRTGFLGSPAPFPVSPWLLAHALQVPVVLCFGL
YLGGNRYRLVFEPFCDRVEVPRQARGPALDALIARYAQRLEHYVQVAPYNWFNFYDFWQD
APMAADPAAAVGERVGA