Protein Info for OKGIIK_16005 in Rhodanobacter sp. FW510-T8

Annotation: Xanthomonadin biosynthesis protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 258 transmembrane" amino acids 41 to 68 (28 residues), see Phobius details amino acids 79 to 96 (18 residues), see Phobius details amino acids 102 to 121 (20 residues), see Phobius details amino acids 156 to 176 (21 residues), see Phobius details amino acids 200 to 222 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (258 amino acids)

>OKGIIK_16005 Xanthomonadin biosynthesis protein (Rhodanobacter sp. FW510-T8)
MFRRRWQAGGFDGANAEPGMTSSSLSSDHTTRRYGLLSLPAYPLLAIAGAVTQRQVFALL
ALALLLTVPMLSQLLARRAAAWLLWSGLLAGLLWTWRHGLAGLLLEAVPVLINALLAGWF
GRTLGTAEPLVERFIVAIEGAERLRQPGVTAYARQVTWFWTVLLAAQALLLAVLLLCADH
DGLLARAGVASPLAVPDRWAAAWLHVGGYLLLGAAFLLEYAYRRWRLRHLHHPGLHDTLL
RLVLHWPQLLRGKRVAAP