Protein Info for OKGIIK_14790 in Rhodanobacter sp. FW510-T8

Annotation: Serine protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF00082: Peptidase_S8" amino acids 183 to 409 (227 residues), 107.7 bits, see alignment E=3.6e-35

Best Hits

KEGG orthology group: None (inferred from 50% identity to aaa:Acav_2620)

Predicted SEED Role

"serine protease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (434 amino acids)

>OKGIIK_14790 Serine protease (Rhodanobacter sp. FW510-T8)
MKHGTLLLVVMAAALGACARTRPMATPDNRAGGGRMAVASASAMDSRRDIILAVANPLEP
PPLHAGSSLLGYAPSRYYGAGQQAASTLAALKKNYRFSEVAGWPIKTLGLYCIVLQPPPG
ASRDSLLKVLAGDRRVRLAQPLHDYAVYAKGPGGGHRYNDPYVSLQRGFVETDAARAHDF
SQGSGVRIAIVDTGVDLVHPDLQGRIHDAHNMVDDDAAAFNRDSHGTEVAGVIAAVGDNH
QGIVGMAPKATLSVYKACWYPPAPHAGARCNSFTLAKALAAILDTDARIVNLSLGGPADP
LLSLLLVQILEQGRIVVAAIPPEGNVDGFPDATPGVILVRVSGPSTAPPGVLSAPGNDIL
TTQPGGSYDFTSGPSMAAPHVSGIAALLLSLVPGLETRTVHDLLLRSSKVSGGVLQVNAA
SAVADLRSMREATR