Protein Info for OKGIIK_14735 in Rhodanobacter sp. FW510-T8

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 transmembrane" amino acids 7 to 27 (21 residues), see Phobius details amino acids 33 to 54 (22 residues), see Phobius details amino acids 75 to 97 (23 residues), see Phobius details amino acids 142 to 174 (33 residues), see Phobius details amino acids 184 to 205 (22 residues), see Phobius details amino acids 229 to 244 (16 residues), see Phobius details amino acids 287 to 310 (24 residues), see Phobius details amino acids 320 to 340 (21 residues), see Phobius details amino acids 346 to 366 (21 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 62% identity to xca:xccb100_2585)

Predicted SEED Role

"FIG01213081: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>OKGIIK_14735 hypothetical protein (Rhodanobacter sp. FW510-T8)
MKRLLRLPSIWLGPPILLACGLTWLTYDLSADYLQGLLLLAVLAAAIILFDVQAGVRLPE
LARFRVRHYAGTREAFLALALAGLIVVFCLLDLALFPIPLFDKPSAYASMDGGRAHIRHV
SDMCWVLPPIGLLCARSRRLRIALIAIGFVFPVLVIDRNRLFATFFSFGLVLVLRRDEAR
PLPWRTLLGLALAGSSIFSILGMLRSGPLEHITLPFSATYHAAPQGIKWLLLYASAGPYN
FSAILAKGYRNADFLINQLVPLHGSVATAGTGIPLDAPNINVGTEFFPFLMAFGPFGAAL
AVFALYAMLLWSVQRLRPAVPLFSLLIFLRVAYVCVMSPFGPQAFTWTNAGFIGICLLLP
AMATWLPNRRVPAVAPTPSPPSLQRVADHGTR