Protein Info for OKGIIK_14435 in Rhodanobacter sp. FW510-T8

Annotation: IS630 family transposase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 361 PF13384: HTH_23" amino acids 33 to 79 (47 residues), 38.5 bits, see alignment 1.8e-13 PF13518: HTH_28" amino acids 37 to 87 (51 residues), 37.7 bits, see alignment 4.3e-13 PF13551: HTH_29" amino acids 37 to 96 (60 residues), 44.2 bits, see alignment E=4.2e-15 PF13565: HTH_32" amino acids 63 to 134 (72 residues), 62.5 bits, see alignment E=1.1e-20 PF13358: DDE_3" amino acids 175 to 320 (146 residues), 78.6 bits, see alignment E=1.2e-25

Best Hits

KEGG orthology group: None (inferred from 88% identity to ajs:Ajs_1379)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (361 amino acids)

>OKGIIK_14435 IS630 family transposase (Rhodanobacter sp. FW510-T8)
MARPGRPVAKLEITDAERTELKARLRIRKGPEDEKLRIRIVLGCADGHSGTRIAERLQTT
IQTVSKWRRRYAAYRLAGLTDAPRAGRPRTVDDAQVQAIVDKVRQSTPTNATHWSVRTMS
RETGVSPATVQRIWHAFGLKPHLQETFKLSTDPHFVDKVRDVVGLYLAPPDRALVLCVDE
KSQIQALNRTQPGLPLTFGQPATRTHDYKRHGTTSLFAALDVATGKVIGQLKRRHRSAEF
LQFLKTIDAAVPADHDIHLIMDNYGTHKTDKVRTWFAAHPRYHVHFTPTSASWLNLVERF
FGRISEQWIKRNAHTSVADLEQSIRDYIDRHNADPKPFVWHKSADTILASVARAASKISC
I