Protein Info for OKGIIK_14335 in Rhodanobacter sp. FW510-T8

Annotation: Oar protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 787 PF00593: TonB_dep_Rec" amino acids 134 to 497 (364 residues), 29.1 bits, see alignment E=4.9e-11

Best Hits

Predicted SEED Role

"Oar protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (787 amino acids)

>OKGIIK_14335 Oar protein (Rhodanobacter sp. FW510-T8)
VINQIGKRGTNEWHFGAQVVWQPRFLEGTPVNNRYGNPTIPASIANPNSPDGLTHFQLED
PKKPGTLNQYRADNKQWETIYSAYVGGPLIQDKLFMFLAAETDKTQSNNVESAAAQKVQY
NRDQNTKFYGKLDWNITDSNILELTALQNHSRTGAGSTYKFDYNTLKSGAFVTKNDVTKD
NAQFYLGHFTSYITDAATLSILYGKANFQDPVVYANTSPLPFISRPYNQNPAFLPPGTGP
NGIVNAQTNTSWTSPKASNNTHGLRVDFDYKLGDHDLAVGIDNMTYAASHQGPDQTNPFN
PSINYYWRYYPGNIVRKREIGWATSMRMTQKAYYLQDDWQVASNVLLNIGVRNDHFTNYN
DQGKPFVDEKNQWEPRIGASWDVMGDSSFKVYGNAGRYYLALPDNAAERAANISTYEITK
YSYTGIDANGIPTGLKQIGGVSSPDGEFGLPKNPQEVTARNLKPEYVDEFILGFDKKFND
SWTYGAKATWRDLKTAIDDECSPGQIATKMTSMGLNPGDYSDSLYGASYCRLINPGQTNT
MLINKNGGGSSVLVSMSQKDWGYINGVKRKIGSLNLYLEHPFDGKWMGRVDYTFSRGFGN
TEGQVRSDFGQSDVSKTEDWDSWQLMDGQDGELSNIRKHQIRFRGAYQITPEWLVSGTLL
AQSGTPKECLGYYGPTGTGDPTGYNGGGSGNYHWCHGVRIPPGKAGHTPWTEQVNLGLHY
APAFADHKLGFNLDVINALNQHKAVQTDPAGEAAFDGVNTVYINNSYGDGIFWQPPRMVR
LSVQYDY