Protein Info for OKGIIK_12455 in Rhodanobacter sp. FW510-T8

Annotation: 2-hydroxy-palmitic acid dioxygenase Mpo1-like

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 156 transmembrane" amino acids 22 to 42 (21 residues), see Phobius details amino acids 49 to 67 (19 residues), see Phobius details amino acids 73 to 92 (20 residues), see Phobius details amino acids 99 to 118 (20 residues), see Phobius details amino acids 128 to 147 (20 residues), see Phobius details PF06127: Mpo1-like" amino acids 1 to 149 (149 residues), 70.7 bits, see alignment E=4.8e-24

Best Hits

KEGG orthology group: None (inferred from 54% identity to sml:Smlt4319)

Predicted SEED Role

"FIG01112621: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (156 amino acids)

>OKGIIK_12455 2-hydroxy-palmitic acid dioxygenase Mpo1-like (Rhodanobacter sp. FW510-T8)
MRTMQDWLDSYSGDHQNPTNQVFHWFCVPPIVWSVIALLWAIPVPVSQLRPGSWAVLVMV
LAFYWYWKRSHRLAIGLLIAFALLGLLTHFLYGRLGAAQLCWLAAGVFVVAWIGQFIGHK
FEGRKPSFLTDLSYLLIGPAWLMAKLLRKLGFKQVT