Protein Info for OKGIIK_10970 in Rhodanobacter sp. FW510-T8

Annotation: AmiS/UreI transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 164 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 31 to 50 (20 residues), see Phobius details amino acids 57 to 79 (23 residues), see Phobius details amino acids 85 to 105 (21 residues), see Phobius details amino acids 113 to 134 (22 residues), see Phobius details amino acids 140 to 162 (23 residues), see Phobius details PF02293: AmiS_UreI" amino acids 1 to 161 (161 residues), 173.6 bits, see alignment E=1.8e-55

Best Hits

Swiss-Prot: 41% identical to AMIS_PSEAE: Putative transporter protein AmiS (amiS) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: None (inferred from 56% identity to bcj:BCAM1314)

Predicted SEED Role

"Urea channel UreI" in subsystem Urea decomposition

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (164 amino acids)

>OKGIIK_10970 AmiS/UreI transporter (Rhodanobacter sp. FW510-T8)
MLGVVLLFVGVVLIVNGLTLAGRIEAKEAAVLNLLVGSLSAFAAVLGAIQASTPADFLAV
GSGLLFAFTYLYVAGVHWFKLSGTGLGWYCLFVAITALPLSWDAYTLGELRMAGIWLVWS
SLWLLFFIDLCTSVRVKRFLAPYAVIVGIVTCWIPGMLMLLARW