Protein Info for OKGIIK_10955 in Rhodanobacter sp. FW510-T8

Name: tesA
Annotation: Lysophospholipase L1 or related esterase Includes spore coat protein LipC/YcsK

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 197 signal peptide" amino acids 1 to 14 (14 residues), see Phobius details PF00657: Lipase_GDSL" amino acids 19 to 185 (167 residues), 41.3 bits, see alignment E=2e-14 PF13472: Lipase_GDSL_2" amino acids 21 to 179 (159 residues), 80.1 bits, see alignment E=3e-26

Best Hits

Swiss-Prot: 51% identical to EST_PSEAE: Esterase TesA (tesA) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K10804, acyl-CoA thioesterase I [EC: 3.1.1.5 3.1.2.-] (inferred from 57% identity to xca:xccb100_3574)

MetaCyc: 44% identical to multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 (Escherichia coli K-12 substr. MG1655)
Acyl-CoA hydrolase. [EC: 3.1.2.20]; Oleoyl-[acyl-carrier-protein] hydrolase. [EC: 3.1.2.20, 3.1.2.14]; 3.1.2.14 [EC: 3.1.2.20, 3.1.2.14]; Lysophospholipase. [EC: 3.1.2.20, 3.1.2.14, 3.1.1.5]

Predicted SEED Role

"Arylesterase precursor (EC 3.1.1.2)" (EC 3.1.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.1.5, 3.1.2.-

Use Curated BLAST to search for 3.1.1.2 or 3.1.1.5 or 3.1.2.- or 3.1.2.14 or 3.1.2.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (197 amino acids)

>OKGIIK_10955 Lysophospholipase L1 or related esterase Includes spore coat protein LipC/YcsK (Rhodanobacter sp. FW510-T8)
LLVFLCGIGSAQAAAPKTVLVLGDSLSAAHNIPVEAGWVHLLGARLDQMVPKWRAINASI
SGETSLSGRNRLPALLATYRPAVLVLELGANDGLRGLPLPALRDNLDATIRAAQQAKVRV
LLVGIELPVNYGPRYRDGLRAIYAELAQSRHVALVPFLLEGVALDPALMQADGLHPVAAA
QPRVLDTVWKPLQALLR