Protein Info for OKGIIK_10860 in Rhodanobacter sp. FW510-T8

Name: lgt
Annotation: prolipoprotein diacylglyceryl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 303 transmembrane" amino acids 53 to 70 (18 residues), see Phobius details amino acids 90 to 111 (22 residues), see Phobius details amino acids 130 to 147 (18 residues), see Phobius details amino acids 159 to 177 (19 residues), see Phobius details amino acids 210 to 228 (19 residues), see Phobius details amino acids 235 to 255 (21 residues), see Phobius details amino acids 273 to 293 (21 residues), see Phobius details TIGR00544: prolipoprotein diacylglyceryl transferase" amino acids 41 to 292 (252 residues), 247.1 bits, see alignment E=1.2e-77 PF01790: LGT" amino acids 43 to 290 (248 residues), 262.6 bits, see alignment E=1.5e-82

Best Hits

Swiss-Prot: 59% identical to LGT_CHRSD: Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase (lgt) from Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)

KEGG orthology group: K13292, phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC: 2.-.-.-] (inferred from 58% identity to hch:HCH_05858)

Predicted SEED Role

"Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)" (EC 2.4.99.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.-.-.-

Use Curated BLAST to search for 2.-.-.- or 2.4.99.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (303 amino acids)

>OKGIIK_10860 prolipoprotein diacylglyceryl transferase (Rhodanobacter sp. FW510-T8)
MILASARERAKVAAADAPPARYTWALPSDPVAMPQPYVVDINPVAFHLGPIQVHWYGLMY
LLGFFFVAVLGEYRRRRGRLPVSRDALGDLLFYGMLGVIVGGRVWYMLFYADISWIWTAP
QTLFKVWDGGMSFHGGLLGVLAAGWWWSRKQQLHFFDTIDFVAPLVPIGLGLGRLGNFIN
GELWGKPGDVPWAMIFPNAPDRLPRHPSQLYELLLEGVVMFVVLWLVSLKPRPRYLVSGL
FALMYGCFRFMVEFVRVPDPQLGYLFGTQWVTMGQMQSLPLIAIGLVLVAMSWRAPTLPL
TAA