Protein Info for OKGIIK_10755 in Rhodanobacter sp. FW510-T8
Annotation: UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 47% identical to SPSC_BACSU: Spore coat polysaccharide biosynthesis protein SpsC (spsC) from Bacillus subtilis (strain 168)
KEGG orthology group: None (inferred from 70% identity to hna:Hneap_0240)Predicted SEED Role
"Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (386 amino acids)
>OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (Rhodanobacter sp. FW510-T8) MHEEPFLIFGSPLIEQAEIDEVVACMQSAWLGTGPRVAQFERDFAVYQTLAPMQVAAVNS CTAALHVSMVAAQLEPCAEVITTPMTFCASVNAIIHAGLNPVLADIDPLSQNIDPAAIEA AITPRTRAILPVHFAGRPCEMDSIMAIARKHGLVVIEDCAHAIETTYRGRKAGTFGDFGC FSFYATKNVVTGEGGMIVGRDELSIARAKMLALHGMSKDAWHRFGDQGYKHYQVIEAGFK YNMMDLQAAIGIHQLARVGQTWTRREAIWNRYMEAFADLPIGLPTVPAPDTKHAYHLFTI MIDKARCGISRDAFLDAMNSRRIGTGVHYLSVPEHPYYQQRYGWKPEQWPNAMCVGRQTV SLPLSPKLTDADVERVVEATRQLVCA