Protein Info for OKGIIK_09315 in Rhodanobacter sp. FW510-T8

Name: feoB
Annotation: ferrous iron transport protein B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 611 transmembrane" amino acids 217 to 241 (25 residues), see Phobius details amino acids 276 to 299 (24 residues), see Phobius details amino acids 319 to 344 (26 residues), see Phobius details amino acids 358 to 383 (26 residues), see Phobius details amino acids 393 to 414 (22 residues), see Phobius details amino acids 456 to 474 (19 residues), see Phobius details amino acids 490 to 507 (18 residues), see Phobius details amino acids 514 to 535 (22 residues), see Phobius details amino acids 544 to 565 (22 residues), see Phobius details amino acids 585 to 607 (23 residues), see Phobius details PF02421: FeoB_N" amino acids 7 to 166 (160 residues), 177.6 bits, see alignment E=2.6e-56 PF01926: MMR_HSR1" amino acids 7 to 124 (118 residues), 64.8 bits, see alignment E=1.5e-21 PF07670: Gate" amino acids 284 to 380 (97 residues), 73.4 bits, see alignment E=3.8e-24 amino acids 455 to 581 (127 residues), 50.9 bits, see alignment E=3.8e-17 PF07664: FeoB_C" amino acids 397 to 449 (53 residues), 58.4 bits, see alignment 9.1e-20

Best Hits

KEGG orthology group: K04759, ferrous iron transport protein B (inferred from 74% identity to hse:Hsero_0051)

Predicted SEED Role

"Ferrous iron transport protein B" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (611 amino acids)

>OKGIIK_09315 ferrous iron transport protein B (Rhodanobacter sp. FW510-T8)
MSASTLRIALVGNPNCGKTALFNQLTGGRQKVANYAGVTVERKEGRFTAPSGRVLQILDL
PGTYSLEANSPDEQITRDVCAGNFPGEAVPDLIVCVADATNLRLHLRFVLEVKRLGRPVV
LALNMMDTARQRGIVIDVPELQRRLGLPVVETVAVKRGGAHSLIERVDGEVPAAAPVQPD
DAASRADLHAQVRELLAATVTMPRTTAALDDALDRWALHPVFGLAILAVVMFLVFQAVYA
AGKPVSDVVGDGFGWMGEHVAALMPAGPLQSLVVDGLFGGLGTVLGFLPVILVLFFFILT
LEESGYLPRAAFLLDRLMLSVGLTGRSFIPLLSSFACAIPGIMGTRSITDPRDRLTTILI
APLMTCSARLPVYALLIGAFIPIRYVFGVFNLQGIVLFALYLAGILGAMLVGWVMKRIRR
DKSEHALLMELPSYRMPRPRDVAIGLYERGMIFLKRLTGVILGLTVLMWFLSTFPGAPEG
ATLPAIDYSFAGYIGRGLQYVFAPIGFNWQISLALIPAFAARETAVAALATVYLVGGEGE
GLGQALAGQIPLASALSLLVWFAYAPQCMSTLAIIKRETDSWRNVAISFGYMFVMAYAAS
FVVYQVARALT