Protein Info for OKGIIK_07640 in Rhodanobacter sp. FW510-T8

Name: aat
Annotation: leucyl/phenylalanyl-tRNA--protein transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 241 PF03588: Leu_Phe_trans" amino acids 36 to 206 (171 residues), 230.1 bits, see alignment E=5.9e-73 TIGR00667: leucyl/phenylalanyl-tRNA--protein transferase" amino acids 37 to 217 (181 residues), 204.3 bits, see alignment E=6.2e-65

Best Hits

Swiss-Prot: 60% identical to LFTR_XANC5: Leucyl/phenylalanyl-tRNA--protein transferase (aat) from Xanthomonas campestris pv. vesicatoria (strain 85-10)

KEGG orthology group: K00684, leucyl/phenylalanyl-tRNA--protein transferase [EC: 2.3.2.6] (inferred from 61% identity to psu:Psesu_1539)

Predicted SEED Role

"Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)" in subsystem Protein degradation (EC 2.3.2.6)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.2.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (241 amino acids)

>OKGIIK_07640 leucyl/phenylalanyl-tRNA--protein transferase (Rhodanobacter sp. FW510-T8)
MHLPLLDPDDPDRFPDPGCALAEPNGLLAFGGDLSPRRLLAAYRQGIFPWYGEGEPILWW
SPDPRCLFSTATLRINRSLRRQLAGKRWRLSLDHAFEQVVRACAAPRTRDSGTWLVPAMI
DAYVRLHKLGHAHSVEVWDGERLVGGIYGVAVGRLFCGESMFSAESGGSKLALVALARLL
HAMDFPLLDAQVSNAHTLGLGAVEMPRGQFLQEVARLGRLAGPDGSWAGLTPRLIQPCAG
H