Protein Info for OKGIIK_06720 in Rhodanobacter sp. FW510-T8

Annotation: Peptidase S8

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 410 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF00082: Peptidase_S8" amino acids 188 to 406 (219 residues), 74.7 bits, see alignment E=4.1e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (410 amino acids)

>OKGIIK_06720 Peptidase S8 (Rhodanobacter sp. FW510-T8)
MPLHCLSAMLAPLLAIALAVAGAAPAQAQVLGPVQSLPNLQMPGVVPASPLRSVDDLLRG
PLALTRKLQVDTLLRKEPRRVDVDPRGAPILRGEFLAMGLSDAQRDALQVLGFGVDRETP
ADATLGLDFVVLHDTRGRSTASAMRALQRAAPDAAFTYQHLYLPAGTGEAAPATTTAVPS
STPPVQRVGLIDGGVDPADPALAHAHIERHGCSTANPSRHGTTVAARLVDGDPDTLYAAD
LWCGDAVGGATSNLVDALAWMARERVAVINISLVGPDNPVLARAVQAMIARGHVLVSAVG
NDGPAAPPLFPAAYPGVIGVSGVDAHDRVLPESGSGDQVDFCASGVVGSGRDALRGTSFA
APIVARKAARLLDAPREGAAAQVQRQLIDEARHLGAPGHDPRYGYGLLSP