Protein Info for OKGIIK_06250 in Rhodanobacter sp. FW510-T8

Annotation: Copper chaperone

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 95 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF00403: HMA" amino acids 27 to 86 (60 residues), 63.6 bits, see alignment E=9.1e-22

Best Hits

Swiss-Prot: 33% identical to MERP_ACICA: Mercuric transport protein periplasmic component (merP) from Acinetobacter calcoaceticus

KEGG orthology group: K08364, periplasmic mercuric ion binding protein (inferred from 38% identity to maq:Maqu_0240)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (95 amino acids)

>OKGIIK_06250 Copper chaperone (Rhodanobacter sp. FW510-T8)
MRQWLFVMVAILGLGMAHAATPTTAVLHAANMTCPSCSVTIKKALSRIAGVTSSKVDLKA
ETVTVTFDADRTTESTLARTVTEAGFPATAQNHGG