Protein Info for OKGIIK_04180 in Rhodanobacter sp. FW510-T8

Annotation: class I SAM-dependent methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 278 PF13489: Methyltransf_23" amino acids 60 to 209 (150 residues), 55 bits, see alignment E=2.6e-18 PF13847: Methyltransf_31" amino acids 61 to 169 (109 residues), 42.7 bits, see alignment E=1.5e-14 PF13649: Methyltransf_25" amino acids 64 to 156 (93 residues), 54.1 bits, see alignment E=6.4e-18 PF08242: Methyltransf_12" amino acids 65 to 157 (93 residues), 36.6 bits, see alignment E=1.9e-12 PF08241: Methyltransf_11" amino acids 65 to 159 (95 residues), 62 bits, see alignment E=2e-20

Best Hits

KEGG orthology group: None (inferred from 48% identity to pae:PA5459)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (278 amino acids)

>OKGIIK_04180 class I SAM-dependent methyltransferase (Rhodanobacter sp. FW510-T8)
MPHRVDHPDGAPSAPDDRHPSPAGGDEPRGASAVGLHDARLSGWYREDSAELFRGVPIGA
DDVVVDVGCGAGVNSVFCARHGARVVAIDREAQLVYEVRARLAAAGTGAHTSVVSDANPL
PLEDGMATRVICTEVLQLVDDPRQVLAELFRVGAPGALYLLSVPGALQEDLQQRVLPPEY
REQPGGHLRIIGRDEFAQMAGDAGLVVVEHIPYGFFWSIWWALFWACKVELYDPAHPVLD
HWTAAWRALLEMPQGRQLKQQLDQFMPISQVIVARKPG