Protein Info for OKGIIK_01555 in Rhodanobacter sp. FW510-T8

Annotation: Site-specific DNA-methyltransferase (adenine-specific)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 669 PF01555: N6_N4_Mtase" amino acids 105 to 380 (276 residues), 126.6 bits, see alignment E=7.1e-41

Best Hits

KEGG orthology group: None (inferred from 70% identity to avn:Avin_24470)

Predicted SEED Role

"Type III restriction-modification system methylation subunit (EC 2.1.1.72)" in subsystem Restriction-Modification System (EC 2.1.1.72)

Isozymes

Compare fitness of predicted isozymes for: 2.1.1.72

Use Curated BLAST to search for 2.1.1.72

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (669 amino acids)

>OKGIIK_01555 Site-specific DNA-methyltransferase (adenine-specific) (Rhodanobacter sp. FW510-T8)
MGNGRVTNSLLEQLPEIIREGRKQAEKILESLEGRHRVSLQTREWVLPSKDTRDGDWITA
ANRQAHLGDEGTADWTNRLIYGDNLLAMAALLAGDEHTPSLRGKVDLIYIDPPFDSKADY
RTKVSLPGVELEQKPTVIEQFAYSDTWSQGTASYLEMITPRLVLMRELLADTGSIHVHLG
IQVSHYVKIVMDEIFGKDNFVQEVIWAYGSPSGGRAAGPKMVKIHEYIAHYAKSYDNRYT
KKVYLPYEQKYIDDWFKYTDEDGRRYRIRLRGKDDEGENIVDRQYLDESKGLPASTVWTD
IKQIYADPRAYKENQAKHSEITGYDTQKPERLLERIIEHSCPNTGLVADFNGGSGTTAAV
AEKLGRRWITTDLGKPACMIMRKRLIDQGAKPFLYQAIGDYQVEAAKSSLGRKFRVGDLS
GIVLSLYGALPLQPEDNPLRNLGAVVYGGKKTLVLVDSPNKLTGDATLRKAIAQREHLLG
GWDRVVVLGWNFEPSIGQSITALNDPRLEVLVIPPDLLDRLRKKGGIEKLRGQVRFSSLQ
YLTIKPVQRQRSGDEEQLQVTLDNYVLLSPEAINLDEENRKKLLKVANAEPLALIEYWAV
DPDYDGAVFRSVWQDYRGNTANDDDALRAVTAANFNVPHKAGERRVCVRVVDVFGFEAEV
VQVVAEGGK