Protein Info for OKFHMN_20700 in Escherichia coli ECRC101

Name: pncC
Annotation: nicotinamide-nucleotide amidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 165 PF02464: CinA" amino acids 8 to 159 (152 residues), 198.2 bits, see alignment E=3.2e-63 TIGR00199: amidohydrolase, PncC family" amino acids 13 to 158 (146 residues), 212.8 bits, see alignment E=1.2e-67

Best Hits

Swiss-Prot: 99% identical to PNCC_ECOLI: Nicotinamide-nucleotide amidohydrolase PncC (pncC) from Escherichia coli (strain K12)

KEGG orthology group: K03743, (no description) (inferred from 99% identity to eco:b2700)

MetaCyc: 99% identical to NMN aminohydrolase (Escherichia coli K-12 substr. MG1655)
Nicotinamide-nucleotide amidase. [EC: 3.5.1.42]

Predicted SEED Role

"C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.1.42

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (165 amino acids)

>OKFHMN_20700 nicotinamide-nucleotide amidase (Escherichia coli ECRC101)
MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAGSSAWFERGFVTYSNEA
KAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSISGIAGPDGGSEEKPVGTV
WFAFATARGEGITLRECFSGDRDAVRRQATAYALQTLWQQFLQNT