Protein Info for OKFHMN_17560 in Escherichia coli ECRC101
Name: tsaC
Annotation: L-threonylcarbamoyladenylate synthase type 1 TsaC
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to TSAC_ECO57: Threonylcarbamoyl-AMP synthase (tsaC) from Escherichia coli O157:H7
KEGG orthology group: K07566, putative translation factor (inferred from 99% identity to eco:b3282)MetaCyc: 99% identical to L-threonylcarbamoyladenylate synthase (Escherichia coli K-12 substr. MG1655)
RXN-14569 [EC: 2.7.7.87]
Predicted SEED Role
"TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA"
MetaCyc Pathways
- N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis (2/2 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.7.87
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (190 amino acids)
>OKFHMN_17560 L-threonylcarbamoyladenylate synthase type 1 TsaC (Escherichia coli ECRC101) VNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL IAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD ALTGELFRQG