Protein Info for OKFHMN_14780 in Escherichia coli ECRC101

Name: mioC
Annotation: FMN-binding protein MioC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 147 PF00258: Flavodoxin_1" amino acids 7 to 138 (132 residues), 99 bits, see alignment E=1.4e-32

Best Hits

Swiss-Prot: 100% identical to MIOC_ECO57: Protein MioC (mioC) from Escherichia coli O157:H7

KEGG orthology group: K06205, MioC protein (inferred from 99% identity to eco:b3742)

Predicted SEED Role

"Flavoprotein MioC" in subsystem Flavodoxin

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (147 amino acids)

>OKFHMN_14780 FMN-binding protein MioC (Escherichia coli ECRC101)
MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLSASGIWLVISSTHGAG
DIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGET
LKINILDHDIPEDPAEEWLGSWINLLK