Protein Info for OKFHMN_08825 in Escherichia coli ECRC100

Name: cynX
Annotation: cyanate transporter CynX

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 393 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 43 to 64 (22 residues), see Phobius details amino acids 76 to 94 (19 residues), see Phobius details amino acids 100 to 121 (22 residues), see Phobius details amino acids 133 to 156 (24 residues), see Phobius details amino acids 162 to 182 (21 residues), see Phobius details amino acids 210 to 232 (23 residues), see Phobius details amino acids 240 to 260 (21 residues), see Phobius details amino acids 272 to 290 (19 residues), see Phobius details amino acids 296 to 318 (23 residues), see Phobius details amino acids 330 to 348 (19 residues), see Phobius details amino acids 363 to 381 (19 residues), see Phobius details TIGR00896: cyanate transporter" amino acids 10 to 362 (353 residues), 473.6 bits, see alignment E=2e-146 PF07690: MFS_1" amino acids 26 to 346 (321 residues), 97.8 bits, see alignment E=9.6e-32 PF06779: MFS_4" amino acids 29 to 335 (307 residues), 28.1 bits, see alignment E=2e-10

Best Hits

Swiss-Prot: 98% identical to CYNX_ECOLI: Cyanate transport protein CynX (cynX) from Escherichia coli (strain K12)

KEGG orthology group: K03449, MFS transporter, CP family, cyanate transporter (inferred from 98% identity to ecl:EcolC_3284)

Predicted SEED Role

"Cyanate transport protein CynX" in subsystem Cyanate hydrolysis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (393 amino acids)

>OKFHMN_08825 cyanate transporter CynX (Escherichia coli ECRC100)
MRNHQKTFTMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGL
ALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPS
VIKRRFQQRTPLVMGLWSAALMGGGGLGAALTPWLVQHSETWYQTLAWWALPAVVALFAW
WWQSTREVASSHKTTTIPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQ
YSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALALQLVGFCGFIWLPLQLPVLWAM
VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYL
MDWAFHALCVVGLMIITLRFAPARFPQLWVKEA