Protein Info for OHPLBJKB_04357 in Escherichia coli HS(pFamp)R (ATCC 700891)

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1769 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details TIGR01414: outer membrane autotransporter barrel domain" amino acids 1325 to 1769 (445 residues), 297.9 bits, see alignment E=6.8e-93

Best Hits

Swiss-Prot: 100% identical to YUAO_ECOLI: Uncharacterized protein YuaO (yuaO) from Escherichia coli (strain K12)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1769 amino acids)

>OHPLBJKB_04357 hypothetical protein (Escherichia coli HS(pFamp)R (ATCC 700891))
MKELKKINRYIMCFFLGSRLAYAENIDGSSTISNRDISGSLNIGINKDANIDINGTVNIK
DYFSVATCNGQSSTCPEGGLNASAKIDKSASVGASVTIVGDSSKGELNIDGGSTLYTQQL
WVSGNDNDKTSNVSDDSNGSLSINNGSNVFVVSSQDDTPFKTNSVKWNQNIISQGNNITD
GTVSSGDLVLGKTGNGIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSEINIKNESNFSVH
GDMKGGISAAGKLNLNMDNSSNLHVDKNIAVGIGRESNITVSASRESSIFSDGNFTVATG
NNSNANLKLDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSSSDMTLAKGKGTQANINI
SSSELNTGSLSVGEGDNADVKMTGSGASVSSKKTFTVAKGNNASATLNYTGSKIDIGSGY
IGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASV
DVTATNAVLSADSLSLGGGEAAKVTMTGSGATVSSKNTFTVAKGNNASATLDYTDSKIDI
GSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSDEMSVAQGS
SASVDVTITNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDS
KINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSI
AQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVARGNNASATLD
YSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSG
NMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVARGNNAS
ATLDYSDSKINIGNGYIGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNM
SIKGNASIGVGDQAKAKFSVKDSVLNIGSSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTA
NNAVVSMSANNSEISVVGDYTVAKGDGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDN
SKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGSYSKNSISITGNSIFDFGSSQ
ESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGS
KAIVNVSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFICMDSGSCADTVINVNRG
TVSLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKEAQVDFNGYSQHMTGIDNKGMI
YLSDGSASSDVYLDKDYVAHDGSGVQFGIFGQKEADVMHVKGDTSGSSGIVVTTNSKNKI
KKGGDILLVEVNGDSSGSFYLNSLIKNGKEYKVTGDYIDVGAWEYALNKKRKNWYLSVDM
RPEPGAFINNSKSMLDMFALQRYDIPGQHRYPTLFENLYNNGMWIQFNNNSGSNSEVYDN
LKTSYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAANKTTSTNNKRATGNVDGYTLGL
YHVFQQNISDGLNESERQGLWTYSSIQYMDYDNSVSSTNNFKANYGVNGFRLTGEVGYLK
NIGGIQPSDFYVEPKLYLSHTELSGGVVEDLQGGKITYPNSLTIIEPGVFFSYRKTHEST
SNDEAMFKDYIKQSVVDAWFGGGYSFKTGNYSRTNFDSDMVEYNTSDNFALKSGVEFEFL
KDARLLLTSSYSINNDRNLSFILGGNYYF