Protein Info for OHPLBJKB_03264 in Escherichia coli HS(pFamp)R (ATCC 700891)

Annotation: putative lipoprotein YajI

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 179 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF11622: DUF3251" amino acids 20 to 176 (157 residues), 294.2 bits, see alignment E=1.3e-92

Best Hits

Swiss-Prot: 98% identical to YAJI_ECOLI: Uncharacterized lipoprotein YajI (yajI) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to ecw:EcE24377A_0443)

Predicted SEED Role

"Hypothetical lipoprotein yajI"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (179 amino acids)

>OHPLBJKB_03264 putative lipoprotein YajI (Escherichia coli HS(pFamp)R (ATCC 700891))
MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLNKETVKITQQNRLNAKS
SSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLRIQGESNDPLPAFSGTVEY
GQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKGISVEQLDFVRIHDIQPVMQ