Protein Info for OHPLBJKB_01217 in Escherichia coli HS(pFamp)R (ATCC 700891)

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1365 TIGR02607: addiction module antidote protein, HigA family" amino acids 7 to 79 (73 residues), 62.6 bits, see alignment 1.2e-21 PF01381: HTH_3" amino acids 18 to 66 (49 residues), 39 bits, see alignment (E = 6.5e-14) PF13560: HTH_31" amino acids 22 to 65 (44 residues), 27.4 bits, see alignment (E = 3.5e-10)

Best Hits

KEGG orthology group: None (inferred from 100% identity to ecx:EcHS_A2644)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1365 amino acids)

>OHPLBJKB_01217 hypothetical protein (Escherichia coli HS(pFamp)R (ATCC 700891))
MTDDSLPLHPGSYVRKNVLDPRGLTVTEVAKLIGVSRPGLSNFLNGKVSATPDMAARLER
AFGISAKAILDLQTEYDAQGDKTAGAAQKARTYVPPFLNVQANDLVNWFTTTILARTKLS
VLLRTLIHSTGRDLQKVDFPGNDDAERAGWDGFIEASSGTPWIPSGASGWEFGVTADIKA
KADGDFAKSVRAIKSAERANITFVFVTPRRWPGKTAWVADMKSKKLWKDIRAYDASDLEQ
WMEQSLAAQTWFANQTDRPSNGVRTLERCWSDWANVAAPALHPSLFTTANEAWNDKIKSF
LAKDDANPLVIAADSVEEALAFLNQVLAPPEFEQYRDRVLVFDKAGVLPKLAQGTTDFIA
VAHTREVERELGPYSTSLRTIVVYPRNATSVEPHVVLEPLGFEPFTKALEAMGKSRDDIA
KLANASGRSLTVLRRQLSNIPAIHTPAWAEDPRIASGIVPLVLVGAWDAQNKADQTILSH
LAEAPFEVLEKRILDLLRLNDSPVWSIGGYRGVISKIDSLFAIADTVSKADLDRFLDVAR
TVLGEDDPALDLPEKDRWAAAIHGKRREFSGAVREGVSETLVLLAVYGKNLFGKHLGFDG
EFEAAKIVRDLLVPVTTRKLEANGRDLPLYAEAAPAEFLDIIERDLRAEKSEVMGLLRPT
DTGFFGSCPRTGLLWALEGLAWNPTTFPRVVKILGQLSEVEINDNWANKPIESLGSILRA
WMPQTAANHEMRLKAVSMLLDKHPAVGWRVCLQQFGDYGSGVGGYSHKPKWRPDGYGFGE
PFKTWGPIHAFVREMVKVALSRPSYTVEMLCDLVSRLHALAAEDQARVWEIIDEWRNSGA
LDEEVAKIREKIRVTVLSRRGRKKVNEEGQASLTEKAKAVYAELQPKDIVNKYEWLFRQG
WVEESADELAGDEMDFRAREQRIEKLRVEALTDIVQERGIPGILALSEKGNSQRQIGAHL
VSGILTDEQIEDLILQCLRPAENYSGRDGIVAGALWSLDEDRRKAIYAGLRDKVVEEETL
RLLLLSPYRASTWVLVDQLSAEARSRYWVEVVPQYVFDSPEENNESVRRLLEVERPRAAF
ASIHFKLEEIHPPLLVQTLSAMAKNSQDKAGEYQLHDYDVRRAFQLLNRNSDLTLEEKAG
LEFAYLEVLARSFRGGDQQQIPNLERYIEEHPELFVQAVVWAYKRKDRGEDPAEFRITEG
REHMARRGYRLLEAIERIPGQDKATKEEQQEKLAEWVATVRRSCAELDRAEIADVCLGKL
FSNAPAGEDGAWPNEAVRDVMEDLRSEDISSGAHTGLYNARGVHWRGEGGGQERELADKY
RAWADTLQFTHPFVASSLLMSMVNTYEREAEQHDTEAGIRRRLRH