Protein Info for OHPLBJKB_00473 in Escherichia coli HS(pFamp)R (ATCC 700891)

Annotation: 50S ribosomal protein L13

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01066: ribosomal protein uL13
  • amino acids 4 to 142 (139 residues), 225.1 bits, E=1.2e-71
• PF00572: Ribosomal_L13
  • amino acids 13 to 131 (119 residues), 163.1 bits, E=1.4e-52

Best Hits

Swiss-Prot: 100% identical to RL13_SALEP: 50S ribosomal protein L13 (rplM) from Salmonella enteritidis PT4 (strain P125109)

KEGG orthology group: K02871, large subunit ribosomal protein L13 (inferred from 100% identity to eco:b3231)

MetaCyc: 100% identical to 50S ribosomal subunit protein L13 (Escherichia coli K-12 substr. MG1655)

Predicted SEED Role

"LSU ribosomal protein L13p (L13Ae)" in subsystem Ribosome LSU bacterial

Protein Sequence (142 amino acids)

>OHPLBJKB_00473 50S ribosomal protein L13 (Escherichia coli HS(pFamp)R (ATCC 700891))
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNAD
KVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFR
KLKVYAGNEHNHAAQQPQVLDI