Protein Info for OH686_17105 in Pseudomonas sp. S08-1

Annotation: dihydropteroate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 283 TIGR01496: dihydropteroate synthase" amino acids 23 to 278 (256 residues), 320.1 bits, see alignment E=6.3e-100 PF00809: Pterin_bind" amino acids 25 to 264 (240 residues), 275.7 bits, see alignment E=2e-86

Best Hits

Swiss-Prot: 58% identical to DHPS_SHIFL: Dihydropteroate synthase (folP) from Shigella flexneri

KEGG orthology group: K00796, dihydropteroate synthase [EC: 2.5.1.15] (inferred from 79% identity to pmy:Pmen_3614)

MetaCyc: 58% identical to dihydropteroate synthase (Escherichia coli K-12 substr. MG1655)
Dihydropteroate synthase. [EC: 2.5.1.15]

Predicted SEED Role

"Dihydropteroate synthase (EC 2.5.1.15)" in subsystem Folate Biosynthesis (EC 2.5.1.15)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (283 amino acids)

>OH686_17105 dihydropteroate synthase (Pseudomonas sp. S08-1)
MIVPQYPPRLPCGSRVLDLAQPQVMGILNVTPDSFSDGGRFAARDAAVRHAAQMVAAGAT
LIDVGGESTRPGARPVSPVEELERVAPVVEAIAAELDVIISLDTSTPAVMREGARLGAGL
INDVRALRRDGALEAAADSGLPVCLMHMLGEPGNMQQNPQYRDVVGEVRDFLAQRMTACV
EAGIPVERIVLDPGFGFAKTLAHNLSLFKRLEALHELGRPLLVGVSRKTMIGQALGREVH
ERLSGGLALVALAVAKGACILRAHDVAETVDAVRMIAAVQTAE