Protein Info for OH686_15555 in Pseudomonas sp. S08-1

Annotation: Monooxygenase, flavin-binding family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 503 PF00743: FMO-like" amino acids 27 to 378 (352 residues), 164.7 bits, see alignment E=1.2e-51 PF07992: Pyr_redox_2" amino acids 28 to 218 (191 residues), 46.4 bits, see alignment E=1.5e-15 PF13454: NAD_binding_9" amino acids 30 to 160 (131 residues), 23.6 bits, see alignment E=1.8e-08 PF13738: Pyr_redox_3" amino acids 30 to 215 (186 residues), 75.8 bits, see alignment E=1.5e-24 PF13450: NAD_binding_8" amino acids 30 to 64 (35 residues), 28.2 bits, see alignment 7.3e-10 PF13434: Lys_Orn_oxgnase" amino acids 107 to 222 (116 residues), 31.3 bits, see alignment E=4.9e-11

Best Hits

KEGG orthology group: None (inferred from 76% identity to psp:PSPPH_2775)

Predicted SEED Role

"monooxygenase, flavin-binding family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (503 amino acids)

>OH686_15555 Monooxygenase, flavin-binding family (Pseudomonas sp. S08-1)
MAKVNAATTRAENTVSTANDIQDCGDAVCIIGAGPGGLCMARALKRQGLAYEQFERHSDV
GGVWDISNPGTPMYQSAHFISSRDLSGFLDFPMPRHFPDYPSHRQILEYVRAFAQAFDLY
AGIRLGTAVSRVEKRDDGRWLVTLGNGERRSYRAVVCATGCNWDPNMPTIKGQFNGEIRH
SMTFKKAAEFSGKRVLIIGAGNSGADIACDAATHAEKAFISLRRGYHFIPKHLFGLPADE
VSEKGPHLPIWLVRPVFSLILRLINGDLTRFGLPRPDHKLFESHPLLNTQLLHYLQHGDI
QAKPDLDHFDGDYAVFKDGSRERIDLALYATGYKWSCKYAADYFEWKGGRPQLYLSIFSR
QHHNLFGIGYLETNSSAYKLFDNEAHAIACYLRDQLQRPEQARQFERLIATDDPDLSGGI
DFIKSQRHEVYLEVHALKTHLRKLRRQMGWGELDEGYYAGLRQHAGFPSAALPAIWADTA
MDQVVSITGAAAGIGQAMRFSNR