Protein Info for OH686_14945 in Pseudomonas sp. S08-1

Annotation: Arylsulfatase A-related protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 571 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF00884: Sulfatase" amino acids 39 to 394 (356 residues), 152 bits, see alignment E=2.3e-48

Best Hits

Predicted SEED Role

"Choline-sulfatase (EC 3.1.6.6)" in subsystem Choline Transport or Choline and Betaine Uptake and Betaine Biosynthesis (EC 3.1.6.6)

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 3.1.6.6

Use Curated BLAST to search for 3.1.6.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (571 amino acids)

>OH686_14945 Arylsulfatase A-related protein (Pseudomonas sp. S08-1)
MQRRELLKKAAALSAAGLAAPLLGQQAAPALARPTGRKPNILLIVTDQQRAHQDLPSAVP
LPGHERLLRRAASLGNFHVNTTPCSPSRSVLFTGQHTQKTLITANVGLPPFRELSPELPT
LGHMLREQGYLTAYKGKWHLSHIEQSSNLTYGVVQPSTDALLPYGFADYNLNGDPHGSLM
TGFIYDKVTASDSVAWLQQHRSDEQPWFLAVNFVNPHDIMFYSSGIRQEQSRLRRNFLGP
ISPGPSTGLYEKHWDLPLPKSFYSEDLSRKPWAQRADVELCNNIYGHLDPKDEQAWQGLQ
SYYLNCVRDVDHSIEQVLLALESSGLADDTIVILTADHGEMAGAHQLRQKGPHMYKENTR
VNFIVRHPDIQQGFTSQALGSTVDIVPTVLELAGLDAAGQAELYPQLAGVSLAESIGGAS
RRSVRDERGHLYDYGVVMYLDPEFTEAVMRDHDQVTPWAFIQESLAQMQLGPSMKNRALF
RGIHDGRYKFARYFAAEDHHIPASFDDLLARNDLELYDTQADPEELHNLAADPQAQRALI
ERLSGRLNELLALEVGVDDGREHPGPTFLYS