Protein Info for OH686_09090 in Pseudomonas sp. S08-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 624 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF06980: DUF1302" amino acids 16 to 624 (609 residues), 567.1 bits, see alignment E=2.5e-174

Best Hits

KEGG orthology group: None (inferred from 55% identity to ppf:Pput_3700)

Predicted SEED Role

"FIG067310: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (624 amino acids)

>OH686_09090 hypothetical protein (Pseudomonas sp. S08-1)
MHEMAATNEGVRFSRLAVAIAAVSLAGTSTQAMAVNFNIGEVEGQFDSTLSVGASWALDD
PDPELLGSRAADDGRRNFKQGETFSKVFKGIHDLELKYGDSGIFVRGNYWYDFELKDEGR
LFKDIDDSNRKTRAQASGVQLLDAFVYHNWSIGDVPGNARLGKQVVNWGEGIFIPGGINV
VNPVDVAAFRRPGAEIKEGLIPVNMFYASQSINDEVSFEGFYQLEWEQTVLDNCGTFFSA
ADVLADGCDELPSGPSLNQSALAQAAFSPFGIKLDEEGIIVPRADDRDARDGGQWGLAVR
WFAPALETEFGGYVMNYHSRQGYLGYIRSPHVADLDFAPQLCSNLGIPLAGCGGFFAGLG
ESLTQVYRLGTSKYFVEYPEDIRLYGLSFSTNLPTGSTLSGELSYRPNLPVQINPVDLGL
ANLGVAELSPLLSSGAITSVNGAVDSGYRRKEVTQAQVALTHFFDQVMGADRLTFVGEVG
VTHVGGLDKKGGIRYGRGSAYGQGELYPDNSLCTSRTNSAFPDNCEDDGFVTSTSWGYRA
RLIAEYNNVIQGVELKPNLAWSHDVSGYGPEPGFNEGAKAISIGLDAVYLSTYTASVSYT
NFFDGKYNTNVDRDFLAMSFGVSF