Protein Info for OH686_08600 in Pseudomonas sp. S08-1

Annotation: septum formation protein Maf

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 201 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF02545: Maf" amino acids 3 to 187 (185 residues), 210.6 bits, see alignment E=8.3e-67 TIGR00172: septum formation protein Maf" amino acids 3 to 184 (182 residues), 173.9 bits, see alignment E=1.3e-55

Best Hits

Swiss-Prot: 68% identical to NTPPA_PSE14: dTTP/UTP pyrophosphatase (PSPPH_4169) from Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)

KEGG orthology group: K06287, septum formation protein (inferred from 76% identity to avn:Avin_12680)

MetaCyc: 54% identical to nucleoside triphosphate pyrophosphatase YhdE (Escherichia coli K-12 substr. MG1655)
Nucleotide diphosphatase. [EC: 3.6.1.9]; 3.6.1.9 [EC: 3.6.1.9]

Predicted SEED Role

"Septum formation protein Maf" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.1.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (201 amino acids)

>OH686_08600 septum formation protein Maf (Pseudomonas sp. S08-1)
MAKLHLASGSPRRRELLAQIGVSFVTLSASIDETALPDEPAERYVERLAREKAQAGLAAL
AAAADCVVLGADTSVVLDGRILGKPESRAEALATLAALSGREHQVLTAVALASAGRIESR
VVTSRVRFRPLRAGEAEAYWDTGEPCDKAGSYGIQGLAAVFVSQIEGSYSAVVGLPLCET
AQLLEEFGIPCWQALPAGPNS