Protein Info for OH686_06975 in Pseudomonas sp. S08-1

Annotation: ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1752 PF12458: DUF3686" amino acids 38 to 485 (448 residues), 674 bits, see alignment E=1.3e-206 PF07728: AAA_5" amino acids 1292 to 1419 (128 residues), 26.4 bits, see alignment 9.6e-10 PF00004: AAA" amino acids 1293 to 1368 (76 residues), 23.6 bits, see alignment (E = 9.3e-09)

Best Hits

KEGG orthology group: None (inferred from 83% identity to pae:PA3728)

Predicted SEED Role

"FIG00948134: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1752 amino acids)

>OH686_06975 ATPase (Pseudomonas sp. S08-1)
MSDAPAATQTQDVLDKAVAEGGAYEVLHKRLLDQGQRLRQITENLNGQRLEEFGSSQMEV
VGRVRIRTENNCIARDIVQVGDCLLFGYNVFLGLKKETGVGDVFSLYRLVGEGDAYEAEP
VPLEGTFLAAPGFINDFNELYSYYKNTRLLQLAIRDGKLLASFQIGERITDIRVFRWSIS
IDGKDVRYIDNRGERDIALPAPFDFEWIKATREMVVEGRHPHLNILDTLFVETIGGDLTI
KVENNTEDGLGIYREEVLDKTQSLDDAQVEFARLGSLVLLKVLPYREEQWRYLVYNGLTG
KVERIDAIGQACVQLPEDHGIIFPGGYYLQNGEYKTFEQSMAGMRFKRAVRSPNGEDVQY
IFYHPEQGRAVLLTYNMINRQLQNPLFGHGYARLEDGRTVIFAAEGEEPTRIHPMQIWQT
PFCSDEFAARQPARSGFLGKIGNAELVRGVSDLYDLCREIDTPAVSVQRYSLLCQNTRRL
FDAYHWLAGEQLAGLAPLLREIAATSELVLDEYEKVESIRKQSAQAMADAESRHKALLDG
LLPDSWDQAQSFVDGLNGITAQRGLLLTIREYRYIDLVRLDAMEAELLAAQERVSAVTAT
FLAGDAALQPFVVRLQGFDEQAQKAETVAQLAEPLAALQTMAADLDMLSGLMASLKIDDA
TQRTRIVESISEIYARLNQAKARAEQRRKGLGSSETVAQFGAQFKLFSQGITNALGQAQD
PERCDEQLARLLVQLEELESQFGDHEQFIGDILAKREELLETFEAHKQALLDERQRKAQS
VLDAAKRILDSLSRRTAKFTQVEELNAFFAADPLILKLREMTGRLRELKDSVKADDIEAR
LKGARDQAVRALRDKSELFEEGGNVIKLGPRHRFSVNTQELDLTLLPRGDQLYLHLTGTD
FLEPLANAELEALRPFWQVALESESENLYRAEYLAGEVLAAADEGREGLGLERLKSLLAQ
PDELARLIRDFAAPRYKEGYEKGIHDHDTAAILTQLLSLRDSAGLLRYGAEARALACLFW
DLRRDNESAAQWPERARTSRHIQQLFGRREGLQQLQGEVAEALQAFLAEQPLGLAATVVS
EAAEYLVQELAAERVEFVFSKYAKQLQEGLKLRLQGARMWDDYQRALANLDGRPAAQWAL
ADNWLRGLCAQDEFAPLAGYVAEAVALSLLSEGFPGRVTEVDLRFTVANLMGEHARIQER
QLVLAVDDLFARLRSHRASFLPGLQRYQALRQEVIGRERDALRLSEFKAKPLSSFVRNKL
INDVYLGFIGDNLAKQMGTAGENKRTDLMGLLMLISPPGYGKTTLMEYVAHRLGLIFMKI
NGPALGHEVRSIDPAQAPDATSRQELEKLNLALEMGNNVMLYVDDIQHTHPEFLQKFISL
CDGTRRIEGVWKGQTKTYDMRGKKFCVIMSGNPYTESGEVFKIPDMLANRADIYNLGDTL
GGMQEAFSLSYIENGLTSNPVLAPLATRDMADVYRFVAKAEGKPFSANELSHGYSGAEIN
EIVSTLQRLMQVRDVVLRVNQQYIASAAQADQYRSEPPFKLQGSYRNMNKMTEKISAVMN
DAELLQLIADHYQGESQLLTTGAEENLLKLAELRGNMTEEQRARWEQIKRDFLRNKAMGG
SDSDVGARVVAQLNDLVEGIRALGGNLQREPQKQQEIPWNELLAGLERLGTVQPQVEVEV
VAPPQPGVQTLLESVAGTLQNSFLPLMNAMDKKIEIDLRTHNRMGDMAQRLRELGQFLGA
PQAPAEVGPEQK