Protein Info for OH686_05500 in Pseudomonas sp. S08-1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 279 PF05114: DUF692" amino acids 9 to 274 (266 residues), 318.5 bits, see alignment E=1.6e-99

Best Hits

Swiss-Prot: 78% identical to Y2158_PSEAB: UPF0276 protein PA14_21580 (PA14_21580) from Pseudomonas aeruginosa (strain UCBPP-PA14)

KEGG orthology group: K09930, hypothetical protein (inferred from 79% identity to pap:PSPA7_1837)

Predicted SEED Role

"FIG023677: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (279 amino acids)

>OH686_05500 hypothetical protein (Pseudomonas sp. S08-1)
MAYGNFVSGAGLGLRRGLLAALQDSASGSVDEQVDFLEIAPENWIGVGGRFGRQLRALTE
RVPFLCHGLSLNLGGVAPLDTELLRAIKVFLDEHGIRGYSEHLSACADDGQLYDLMPLPF
SDGAVRRVAARIRQVEEVLERPLIIENVSAYARLPGELDEIEFVRAVLEEADCQLLLDIN
NVQVNAHNFGFDPRAYIEAMPSERIAYLHVAGHLDQAADLKIDTHGAPVCDPVWQLLAHS
YAVHGMRPTLLERDFNFPPLAELYAEVGQIRRLQREVGA