Protein Info for NOLOHH_10850 in Escherichia coli ECOR27

Name: yghS
Annotation: Uncharacterized ATP-binding protein YghS

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 232 transmembrane" amino acids 84 to 101 (18 residues), see Phobius details amino acids 156 to 173 (18 residues), see Phobius details

Best Hits

Swiss-Prot: 99% identical to YGHS_ECOLI: Uncharacterized ATP-binding protein YghS (yghS) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 99% identity to eco:b2985)

Predicted SEED Role

"Conserved ATP-binding protein YghS"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (232 amino acids)

>NOLOHH_10850 Uncharacterized ATP-binding protein YghS (Escherichia coli ECOR27)
MSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTERIYLGQSSGRIGEWISQLPV
IGAPFGRYLRSKAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGFLLITDR
YPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFA
RKPDHQLAALQEKIAVTPQLTFNGAKILELDGRQPADEIMQASLRAIHAALS