Protein Info for NOLOHH_09885 in Escherichia coli ECOR27

Name: yhbX
Annotation: Putative transferase YhbX

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 505 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 75 to 95 (21 residues), see Phobius details amino acids 107 to 127 (21 residues), see Phobius details amino acids 139 to 159 (21 residues), see Phobius details PF00884: Sulfatase" amino acids 188 to 430 (243 residues), 191.6 bits, see alignment E=1e-60

Best Hits

Swiss-Prot: 100% identical to YHBX_ECOLI: Putative transferase YhbX (yhbX) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to eco:b3173)

Predicted SEED Role

"Outer-membrane protein yhbX precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (505 amino acids)

>NOLOHH_09885 Putative transferase YhbX (Escherichia coli ECOR27)
MVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAIS
VLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLF
SACQFAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLS
VRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVP
LSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYV
RGFDELLLPHLSQALQQKTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNS
IHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWY
SPVLGDGVDRTTENDIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHD
VFDYVMLRKEFTEDKQGNPTPEGQG