Protein Info for NOLOHH_06065 in Escherichia coli ECOR27

Name: yiiG
Annotation: Uncharacterized protein YiiG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 346 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF12889: DUF3829" amino acids 68 to 344 (277 residues), 316.3 bits, see alignment E=1.2e-98

Best Hits

Swiss-Prot: 96% identical to YIIG_ECOLI: Uncharacterized protein YiiG (yiiG) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 98% identity to eoi:ECO111_4719)

Predicted SEED Role

"FIG00638858: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (346 amino acids)

>NOLOHH_06065 Uncharacterized protein YiiG (Escherichia coli ECOR27)
MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAPEAPVAKAEAKPETPAQ
PVVDEQAVFDEKMDVYIKCYNKLQIPVQSSLARYADWLKDFKQGPTGEERTVYGIYGISE
SNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAK
GKTLHQTFLKNLEAFEAVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISA
KQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRR
VRDKVPYSDWDKEQLQDANSSWMVDDSFPRALREYNEMVDDYNSLR