Protein Info for NOLOHH_03905 in Escherichia coli ECOR27

Name: fimG
Annotation: FimG protein precursor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 167 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details

Best Hits

Swiss-Prot: 99% identical to FIMG_ECOLI: Protein FimG (fimG) from Escherichia coli (strain K12)

KEGG orthology group: K07349, minor fimbrial subunit (inferred from 99% identity to eco:b4319)

Predicted SEED Role

"type 1 fimbrae adaptor subunit FimG"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (167 amino acids)

>NOLOHH_03905 FimG protein precursor (Escherichia coli ECOR27)
MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS
AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN
TGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS