Protein Info for NIAGMN_24710 in Escherichia coli ECRC102

Name: espN
Annotation: type III secretion system effector EspN

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1133 PF15962: DUF4765" amino acids 10 to 1132 (1123 residues), 1838.5 bits, see alignment E=0

Best Hits

KEGG orthology group: None (inferred from 100% identity to eoj:ECO26_3664)

Predicted SEED Role

"FIG01046091: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1133 amino acids)

>NIAGMN_24710 type III secretion system effector EspN (Escherichia coli ECRC102)
MKITNYILPTSRTHGSFSTIKSWDTMNYIKHLIRHTNDPIFEEQFYKITQSHIDFDKRAK
DEKNDTINIYDNFFYSSNDDLDSKIRSMLNNLYEKSLTFRRIINYYVKEINLSDYGFLKC
KILPAYAYNYEMENDAPPKILIPIDHNLNFIDAKYNGETYRGNEEFAINLFLQHILHNDI
QEQTSIDLYTSIINKELDSNRKSYNNEIFNNFSFDKSVKLNSYNYIADDIEQVIDKGSKV
QLEVYNLLSEEKIFEHKIMNNWTRSIKNILTTYLFMSSGAVTARNVQTFSPTINNESRIR
LPRALPVGHPYPEEHKASGFSPFMMGGLSGDILPEILTGNGPSIFFNGKHNNQHDGAFGK
IIDFTQNGNKISAKDKEIIKRYIFDKINVLIKEYFIRTGKNSHTPFEVFIKERLFNQYDI
FKTLARDILAHPLVIYDAGYKNYHESLNAAIAINSRPLQEIHYGDVLYHYHKNDISLGVD
TLYGRESFDIVLDAMNVYRKSKKMRVISNNEMKKSIKISELVIHNIIKKGLTNCLLKKDV
LNARYDLIRDILRYSLNIRQGIKHDDVNRIAENIIKKYGITEGMNPKPRNARISKELLLL
AVDRQIEWAKKHFITKDVLENVVSKCDLSSIFNVNKVLQNTILEFVHEINNISSARWMSK
SEKNNKQKEAIEKFKKEVSHMNGGQQFIWGFDKVIQEGLSGLIELSIDINDSTNHRDKSS
LSPDGRAVLHFLGTIWNMAMGAVPGYNALSGVSSILHSAIVKESSNICDYIQGAVRIGMD
FVPGTRSDLHSRSLQIKYEALKHIEKNINDNIIYHPSNNANFYSVIESIDGNDFIYNEKQ
SKILEMKQDRGGNRYSAVDLNSSKYGYYEKVGGGFYRYIESFNPISSETPNKIVYKGESV
DLTKEPNSELYSGRYSINNKQVNVYFFRDADGTFYKSEGLHGGGVIRYIDKPYSQLREGD
IGYDEDLLDIYDDSPVLEDTLPALSSEIVPTPEHSIKQIYSKIKEGHIELSDSDIILCRG
TTGIQAENIVEYKTAGGLPDSNPNVKAPDEYMAQQQVRIGRILPEYTSDLSVADRFSREH
YLIVVKVKAKYITRGSVTESGWVIDKTAPVEPLAIIDRTFGMKENISMVNASK