Protein Info for NIAGMN_10530 in Escherichia coli ECRC102

Name: phnN
Annotation: ribose 1,5-bisphosphokinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 185 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details TIGR02322: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN" amino acids 3 to 178 (176 residues), 246.8 bits, see alignment E=5.4e-78 PF13238: AAA_18" amino acids 6 to 139 (134 residues), 40.1 bits, see alignment E=2.7e-14

Best Hits

Swiss-Prot: 100% identical to PHNN_ECO57: Ribose 1,5-bisphosphate phosphokinase PhnN (phnN) from Escherichia coli O157:H7

KEGG orthology group: K05774, ribose 1,5-bisphosphokinase [EC: 2.7.4.23] (inferred from 100% identity to eco:b4094)

MetaCyc: 100% identical to ribose 1,5-bisphosphate phosphokinase (Escherichia coli K-12 substr. MG1655)
Ribose 1,5-bisphosphate phosphokinase. [EC: 2.7.4.23]

Predicted SEED Role

"ATP-binding protein PhnN; Guanylate kinase (EC 2.7.4.8)" (EC 2.7.4.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.4.8

Use Curated BLAST to search for 2.7.4.23 or 2.7.4.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (185 amino acids)

>NIAGMN_10530 ribose 1,5-bisphosphokinase (Escherichia coli ECRC102)
MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTR
AGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHLPQARARYQSALLPICLQV
SPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEK
HHACL