Protein Info for MPMX26_03059 in Acinetobacter radioresistens SK82

Annotation: 3-hydroxyadipyl-CoA dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02737: 3HCDH_N
  • amino acids 7 to 185 (179 residues), 206.2 bits, E=7.9e-65
• PF03446: NAD_binding_2
  • amino acids 7 to 66 (60 residues), 26 bits, E=1.7e-09
• PF03807: F420_oxidored
  • amino acids 7 to 54 (48 residues), 25.8 bits, 2.7e-09
• PF00725: 3HCDH
  • amino acids 188 to 285 (98 residues), 89.6 bits, E=3.1e-29
  • amino acids 415 to 497 (83 residues), 71.4 bits, E=1.5e-23

Best Hits

KEGG orthology group: K00074, 3-hydroxybutyryl-CoA dehydrogenase [EC: 1.1.1.157] (inferred from 66% identity to acd:AOLE_11935)

Predicted SEED Role

"3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)" (EC 1.1.1.157, EC 1.1.1.35)

MetaCyc Pathways

• oleate β-oxidation (32/35 steps found)
• fatty acid salvage (6/6 steps found)
• (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered) (5/5 steps found)
• adipate degradation (5/5 steps found)
• fatty acid β-oxidation I (generic) (6/7 steps found)
• superpathway of glyoxylate cycle and fatty acid degradation (11/14 steps found)
• benzoyl-CoA biosynthesis (3/3 steps found)
• phenylacetate degradation I (aerobic) (7/9 steps found)
• adipate biosynthesis (4/5 steps found)
• photosynthetic 3-hydroxybutanoate biosynthesis (engineered) (19/26 steps found)
• superpathway of phenylethylamine degradation (8/11 steps found)
• 2-methyl-branched fatty acid β-oxidation (10/14 steps found)
• pyruvate fermentation to butanol II (engineered) (4/6 steps found)
• fatty acid β-oxidation II (plant peroxisome) (3/5 steps found)
• glutaryl-CoA degradation (3/5 steps found)
• pyruvate fermentation to hexanol (engineered) (7/11 steps found)
• L-glutamate degradation V (via hydroxyglutarate) (6/10 steps found)
• methyl ketone biosynthesis (engineered) (3/6 steps found)
• 1-butanol autotrophic biosynthesis (engineered) (18/27 steps found)
• superpathway of Clostridium acetobutylicum acidogenic fermentation (5/9 steps found)
• valproate β-oxidation (5/9 steps found)
• 4-hydroxybenzoate biosynthesis III (plants) (2/5 steps found)
• pyruvate fermentation to butanol I (4/8 steps found)
• benzoyl-CoA degradation I (aerobic) (3/7 steps found)
• fatty acid β-oxidation VI (mammalian peroxisome) (3/7 steps found)
• pyruvate fermentation to butanoate (3/7 steps found)
• superpathway of Clostridium acetobutylicum solventogenic fermentation (7/13 steps found)
• glycerol degradation to butanol (9/16 steps found)
• 3-hydroxypropanoate/4-hydroxybutanate cycle (10/18 steps found)
• superpathway of Clostridium acetobutylicum acidogenic and solventogenic fermentation (9/17 steps found)
• benzoate biosynthesis I (CoA-dependent, β-oxidative) (3/9 steps found)
• 2-methylpropene degradation (2/8 steps found)
• 3-phenylpropanoate degradation (3/10 steps found)
• methyl tert-butyl ether degradation (2/10 steps found)
• L-glutamate degradation VII (to butanoate) (3/12 steps found)
• crotonate fermentation (to acetate and cyclohexane carboxylate) (4/16 steps found)
• L-tryptophan degradation III (eukaryotic) (3/15 steps found)
• benzoate fermentation (to acetate and cyclohexane carboxylate) (4/17 steps found)
• toluene degradation VI (anaerobic) (3/18 steps found)
• androstenedione degradation I (aerobic) (8/25 steps found)
• cholesterol degradation to androstenedione I (cholesterol oxidase) (2/17 steps found)
• superpathway of testosterone and androsterone degradation (8/28 steps found)
• platensimycin biosynthesis (6/26 steps found)
• cholesterol degradation to androstenedione II (cholesterol dehydrogenase) (3/22 steps found)
• androstenedione degradation II (anaerobic) (4/27 steps found)
• superpathway of cholesterol degradation I (cholesterol oxidase) (10/42 steps found)
• superpathway of cholesterol degradation II (cholesterol dehydrogenase) (11/47 steps found)
• superpathway of cholesterol degradation III (oxidase) (5/49 steps found)

KEGG Metabolic Maps

• Benzoate degradation via CoA ligation
• Bile acid biosynthesis
• Biosynthesis of plant hormones
• Butanoate metabolism
• Caprolactam degradation
• Fatty acid elongation in mitochondria
• Fatty acid metabolism
• Geraniol degradation
• Lysine degradation
• Tryptophan metabolism
• Valine, leucine and isoleucine degradation

Isozymes

Compare fitness of predicted isozymes for: 1.1.1.157, 1.1.1.35

Use Curated BLAST to search for 1.1.1.157 or 1.1.1.35

Protein Sequence (505 amino acids)

>MPMX26_03059 3-hydroxyadipyl-CoA dehydrogenase (Acinetobacter radioresistens SK82)
MSIQIQQIGIIGTGTMGAGIAQIAIQSGHDVILFDAKAGAAEQAREKLGKTLNTLASKGK
FSQEKANQDLSHLSIATELEQLKNCDLIVEAIVENLEVKQQLMQQLESLVGTQTILASNT
SSLSITAIAAGCKRPEQIVGYHFFNPVPLMKVVEVIQGFNTREDIVDALMQLSVKMGHHP
VKAQDTPGFIINHAGRAFGSEAYAMLIENVASVSELDRIYRDGIGFKMGPFELVDLTGMD
VSHPVSESIYHQYYEEARYRPSVITRQRYIAKQLGRKTGKGFYDYTTGEKQGEDPAVFVE
KLDQYPTVWIAADLEKDQSILKDYLEQQGITLETGPEPSEQALVLIASYGEDATTAALRY
QINPKQVVCIDLLYGFNKHRTLMPTLITDSKHKTAAHSIFNLDGTSLSMIQESTGFVAQR
VLAMIVNLGCDIAQQGVASVEDINAAVRLGLGYPYGPIEWGDKLGADKILLILDRMSAIS
RDPRYRPSAWLRRRVQLKLPLVTTV