Protein Info for MPMX26_03005 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 206 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details PF01852: START" amino acids 36 to 193 (158 residues), 38.1 bits, see alignment E=1.1e-13 PF03364: Polyketide_cyc" amino acids 48 to 187 (140 residues), 26.2 bits, see alignment E=8.7e-10

Best Hits

KEGG orthology group: None (inferred from 54% identity to acd:AOLE_00170)

Predicted SEED Role

"conserved hypothetical protein; putative signal peptide"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (206 amino acids)

>MPMX26_03005 hypothetical protein (Acinetobacter radioresistens SK82)
MLLSLLITQFTSAEQARLKINKQNIKVWTYQMSRNPAASYKAETVFNVPLERAVALIMDV
ERAQQWVPYMGKISILNRDDQAGEFLLHVVMDLPFPLKDRDLIIQSKITRERNGTVNIRN
RGMADSRFSQPDYIRLQDYQGDWTFQRLGANKVKVTTMGYVNPEGSLPISFMNMFVEQQP
YQMLKIMRSELERPMYINAKLPVAIQ