Protein Info for MPMX26_02900 in Acinetobacter radioresistens SK82

Annotation: Sensor histidine kinase RcsC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1165 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 36 to 54 (19 residues), see Phobius details amino acids 66 to 85 (20 residues), see Phobius details amino acids 114 to 136 (23 residues), see Phobius details amino acids 156 to 174 (19 residues), see Phobius details amino acids 186 to 210 (25 residues), see Phobius details amino acids 239 to 257 (19 residues), see Phobius details amino acids 277 to 297 (21 residues), see Phobius details amino acids 322 to 349 (28 residues), see Phobius details amino acids 377 to 397 (21 residues), see Phobius details amino acids 403 to 427 (25 residues), see Phobius details amino acids 434 to 456 (23 residues), see Phobius details amino acids 492 to 513 (22 residues), see Phobius details PF12860: PAS_7" amino acids 657 to 770 (114 residues), 146.2 bits, see alignment E=1.1e-46 PF00512: HisKA" amino acids 804 to 869 (66 residues), 38.9 bits, see alignment 1.8e-13 PF02518: HATPase_c" amino acids 914 to 1025 (112 residues), 73.9 bits, see alignment E=3.7e-24 PF00072: Response_reg" amino acids 1048 to 1153 (106 residues), 42.9 bits, see alignment E=1.3e-14

Best Hits

KEGG orthology group: None (inferred from 87% identity to aci:ACIAD3465)

Predicted SEED Role

"Sensor histidine kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1165 amino acids)

>MPMX26_02900 Sensor histidine kinase RcsC (Acinetobacter radioresistens SK82)
MNSWLIIGVLALYIFILFVCAFFGEKHASRLSTRGRMLLFSLTLGVYCSSWTFYGATGAA
VREGIIFLPIYLGPLLFVGLGYDIWRRLGRVRQHHAISSIADFVAARYGKSGSLASLVTI
LAVIAIIPYLALQLRAIALSASVILTQNESLHTTTNSVLLLTGVLAILAMMFGTRQIANT
EQHGGLMLAVAFESFVKLFALLCVALFFLFDAPENIVQVSGDVAKTFYEVQLFGVPETFW
VQTLLAALAIICLPRQFHVAVVELRDEKHIRGARRWFAAYLILTTLAIIPIASWALHAAP
NFLTVPDVAVLSLPLSYNQEWLTLLAFLGGFSASTGMLLVSSVALSIMLSNDLIMPALWR
FNIISRHDKRLPQVLKFTRRVCILGVMLLGFLFFHFFNDIDQLSVFGLLAFSAVAQFSPA
LIGGLYWRGGSRQGVYAGLIVGFFMWTYTLLLPTILRSLPESYTEFAQQFLTAGPLGLHW
LRPEALLGFESFAPLTHGVIWALGLNIILYIWVSRIYRPSIAEQIQAESFFYYETKPLPA
HSASTDMSYLHQDAVRLKVGDLMTLARRITGEGPATHAFQQFCAQNNLVLNENSVANGMW
WRFTEQYLAGTIGAASARTLLTTAMVNNGLALGQVANILDQASQWQRFNQNLLMTMIDHM
TQGVSVVDENMCLVAWNNQYLKLFDYPKDLVYVGCPISDLIRYNAERGECGPGSIEEHVR
KRIHWMQVGSAHEFERIRKDGRVIQMRGNPIEGGGFVTTFADITAFRENEAILEARVIDR
TRQLADALAEQQLAREQADKANMSKSRFIAAASHDLLQPMHAARLFSTALEQSVNNDEDR
TTLQQLDRALHGAESMLSALLDIARLEGGNMQPNRQSYPLHDLLRDLELQFKSIASQRNI
QFHVHDAPFWIDTDPQWIRRIVQNFVSNALRYTAKGRVLLGVLRSSERPGHIRIGVWDTG
PGIAEEQRIKLFQEFERCGHTSPWGEQGLGLGLAIVQRMTSLLDYPVHVYSTQGKGSCFI
LEVPIVAPPKTVTAPVQVAPLKTKAYRILCLDNDETILEGMSTLLTKWGYQVFKAREPQQ
AIALIEQENIQVWLIDQHLNQGQLGLDFILEHRHHPVPVALITADSDPELPHRLKQHNIV
LLKKPLKPAALRAWLSGLKIIGDQS